PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1060s0002.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 316aa    MW: 36185.9 Da    PI: 9.1723
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1060s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.63e-10131212198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+k +++s+v+   +l lp +f+++h++k+  + ++tled++g++   k+  ++++             ++++L +gD +vF+l++ ++f
  Kalax.1060s0002.1.p 131 FVKPMLQSHVTGGFWLGLPQRFCKAHMSKE--DEMMTLEDKDGNESPSKYLADRTG------------LNDHELVDGDALVFQLIRPTKF 206
                          89************************9884..559***************444444............57***************97777 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                            +v ++r
  Kalax.1060s0002.1.p 207 --KVYIIR 212
                          ..888877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.29E-16125214IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.6E-12128214IPR015300DNA-binding pseudobarrel domain
CDDcd100171.36E-18129212No hitNo description
PfamPF023625.9E-9131212IPR003340B3 DNA binding domain
SMARTSM010192.3E-13131214IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MVASATSNYE ELRRQRLEKN KKRMEELNLL NLSKSLSAAT PKLSPAKKQW KPKSARKEVD  60
LSAVRRSSHT ADKPQPDYKE GMIEPLGSLR RGPYRRRDLL NRVYVSDEFR MYVVQRAEQL  120
ELELGYEFPC FVKPMLQSHV TGGFWLGLPQ RFCKAHMSKE DEMMTLEDKD GNESPSKYLA  180
DRTGLNDHEL VDGDALVFQL IRPTKFKVYI IRVNEHENGD ESNEDVADED VNDVVLLKSV  240
PIAKPRKVAK PRKVAESSPG TRRSRRKKST DEDEDEDEDD DDDFFLVKVP ETKSGELTNP  300
SAGTRRSKRI KSSRK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010647760.12e-89PREDICTED: B3 domain-containing protein At3g19184 isoform X1
SwissprotQ1G3M31e-70Y3918_ARATH; B3 domain-containing protein At3g19184
TrEMBLF6HQC12e-90F6HQC1_VITVI; Putative uncharacterized protein
STRINGVIT_03s0063g00620.t017e-90(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-63B3 family protein